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2d/register.hh
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1/* -*- mia-c++ -*-
2 *
3 * This file is part of MIA - a toolbox for medical image analysis
4 * Copyright (c) Leipzig, Madrid 1999-2017 Gert Wollny
5 *
6 * MIA is free software; you can redistribute it and/or modify
7 * it under the terms of the GNU General Public License as published by
8 * the Free Software Foundation; either version 3 of the License, or
9 * (at your option) any later version.
10 *
11 * This program is distributed in the hope that it will be useful,
12 * but WITHOUT ANY WARRANTY; without even the implied warranty of
13 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
14 * GNU General Public License for more details.
15 *
16 * You should have received a copy of the GNU General Public License
17 * along with MIA; if not, see <http://www.gnu.org/licenses/>.
18 *
19 */
20
21#ifndef mia_2d_register_hh
22#define mia_2d_register_hh
23
24#include <mia/2d/model.hh>
25#include <mia/2d/timestep.hh>
26#include <mia/2d/cost.hh>
27#include <mia/2d/fatcost.hh>
29
31
32
42{
43public:
59 C2DMultiImageNonrigidRegister(size_t start_size, size_t max_iter,
60 C2DRegModel& model,
61 C2DRegTimeStep& time_step,
62 C2DTransformCreator& trans_factory,
63 float outer_epsilon);
64
71 P2DTransformation operator () (C2DImageFatCostList& cost, P2DInterpolatorFactory ipf);
72private:
73 void reg_level(C2DImageFatCostList& cost, C2DGridTransformation& result, const C2DInterpolatorFactory& ipf);
74 void reg_level_regrid(C2DImageFatCostList& cost, C2DGridTransformation& result, const C2DInterpolatorFactory& ipf);
75
76 size_t m_start_size;
77 size_t m_max_iter;
78 C2DRegModel& m_model;
79 C2DRegTimeStep& m_time_step;
80 float m_outer_epsilon;
81};
82
83
85
86#endif
87
std::shared_ptr< C2DInterpolatorFactory > P2DInterpolatorFactory
Pointer type for the 2D interpolationfactory.
The factory to create an interpolator from some input data.
A 2D non-rigid registration class for time-marching PDE based registration.
Definition: 2d/register.hh:42
C2DMultiImageNonrigidRegister(size_t start_size, size_t max_iter, C2DRegModel &model, C2DRegTimeStep &time_step, C2DTransformCreator &trans_factory, float outer_epsilon)
The time step class for time-marching registration algorithms.
Definition: 2d/timestep.hh:43
Base class for PDE model based registrations.
Definition: regmodel.hh:56
#define EXPORT_2D
Definition: defines2d.hh:37
#define NS_MIA_BEGIN
conveniance define to start the mia namespace
Definition: defines.hh:33
#define NS_MIA_END
conveniance define to end the mia namespace
Definition: defines.hh:36
C2DTransformation::Pointer P2DTransformation
Pointer type for the 2D transformation.